Phylogenomics: Foundations, Methods, and Pathogen Analysis

Phylogenomics: Foundations, Methods, and Pathogen Analysis

Phylogenomics: Foundations, Methods, and Pathogen Analysis

by: Igor Mokrousov (Editor), Egor Shitikov (Editor)

Edition: 1st

Publication Date: 2024-06-03

Language: English

Print Length: 612 pages

ISBN-10: 0323998860

ISBN-13: 9780323998864

Book Description

Phylogenomics: Foundations, Methods, and Pathogen Analysis offers a deep overview of phylogenomics as a field, compelling recent developments, and detailed methods and approaches for conducting new research. Early chapters introduce phylogenomic analysis of viruses and bacteria, deciphering bacterial outbreaks, and evolution of drug resistance and virulence, with a second section on methods offering instruction in tools for SNP calling and dealing with big datasets, use of Bayesian approach in molecular epidemiology, bacterial evolution modeling and evolutionary reconstruction in the presence of mosaic sequences. Part 3 offers various examples of phylogenomic analysis across medically significant bacteria and viruses, including Yersinia pestis, Salmonella, Mycobacterium tuberculosis, HIV-1, measles virus as well as ancient pathogens research. Offers a full overview of phylogenetics and phylogenomics, from its foundations to methods and specialized case studiesPresents methodologies and algorithms for phylogenomic research studies and analyzes medically significant microorganismsConsiders examples of phylogenomic analysis across a range of medically significant pathogensIncludes chapter contributions from leading international experts

Editorial Reviews

Phylogenomics: Foundations, Methods, and Pathogen Analysis offers a deep overview of phylogenomics as a field, compelling recent developments, and detailed methods and approaches for conducting new research. Early chapters introduce phylogenomic analysis of viruses and bacteria, deciphering bacterial outbreaks, and evolution of drug resistance and virulence, with a second section on methods offering instruction in tools for SNP calling and dealing with big datasets, use of Bayesian approach in molecular epidemiology, bacterial evolution modeling and evolutionary reconstruction in the presence of mosaic sequences. Part 3 offers various examples of phylogenomic analysis across medically significant bacteria and viruses, including Yersinia pestis, Salmonella, Mycobacterium tuberculosis, HIV-1, measles virus as well as ancient pathogens research. Offers a full overview of phylogenetics and phylogenomics, from its foundations to methods and specialized case studiesPresents methodologies and algorithms for phylogenomic research studies and analyzes medically significant microorganismsConsiders examples of phylogenomic analysis across a range of medically significant pathogensIncludes chapter contributions from leading international experts

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