Discrete Optimization for TSP-like Genome Mapping Problems

Discrete Optimization for TSP-like Genome Mapping Problems book cover

Discrete Optimization for TSP-like Genome Mapping Problems

Author(s): D Mester (Author), D Ronin (Author), M Frenkel (Author)

  • Publisher: Nova Science Publishers, Inc (US)
  • Publication Date: 18 May 2010
  • Edition: 1st
  • Language: English
  • Print length: 62 pages
  • ISBN-10: 1616681705
  • ISBN-13: 9781616681708

Book Description

This book introduces a discrete optimisation technique in four applications: classic Traveller Salesperson Problem (TSP), Multilocus Genetic Mapping, Multilocus Consensus Genetic Mapping, and Physical Mapping. Each of the four sections contains the problem formulation, description of the algorithm, and experimental results. The foregoing problems are solved on the basis of Guided Evolution Strategy (GES) algorithm. The algorithm was implemented in MultiPoint package (http://multiqtl.com). The developed analytical tools were applied in many genome mapping projects.

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